| Lobosa | Discosea
atau Flabellinea | | Dactylopodida | - Paramoebidae (Paramoeba, Korotnevella, Mayorella)
- Vexilliferidae (Neoparamoeba, Vexillifera)
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| Vannellida | - Vannellidae (Clydonella, Discamoeba, Lingulamoeba, Platyamoeba, Unda, Vannella)
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| Himatismenida | - Cochliopodiidae (Cochliopodium)
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| Dermamoebida | |
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| Thecamoebida | |
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| Centramoebida | - Acanthamoebidae (Acanthamoeba, Comandonia, Protacanthamoeba)
- Balamuthiidae (Balamuthia)
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| Trichosida | |
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| Tubulinea | | Arcellinida | - Arcellidae (Arcella)
- Difflugidae (Centropyxis, Heleopera, Apodera, Difflugia)
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| Echinamoebida | - Echinamoebidae (Echinamoeba, Filamoeba, Gephyramoeba, Hartmannella vermiformis)
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| Euamoebida | - Amoebidae (Amoeba, Chaos, Hydramoeba, Metachaos, Polychaos, Trichamoeba)
- Hartmannellidae (Copromyxa, Copromyxella, Glaeseria, true Hartmannella, Nolandella, Saccamoeba)
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| Leptomyxida | - Leptomyxidae (Leptomyxa, Rhizamoeba)
- Flabellulidae (Flabellula, Paraflabellula)
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| Incertae sedis | |
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